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2021
J. Kumar Tiwari
,
Mandadi, N.
,
Sridhar, J.
,
Mandal, V.
,
Ghosh, A.
,
Kardile, H. B.
,
Naga, K. C.
,
Shah, M. Abas
,
Rawat, S.
,
Venkateswarlu, V.
,
Malik, K.
,
Bhatnagar, A.
,
Chakrabarti, S. K.
,
Kumar, M.
,
Rao, A. R.
, and
Rai, A.
,
“
Draft genome sequencing of the foxglove aphid (Aulacorthum solani Kaltenbach), a vector of potato viruses, provides insights on virulence genes
”
,
Journal of Asia-Pacific Entomology
, vol. 24, pp. 93-102, 2021.
2019
S. Naithani
,
Gupta, P.
,
Preece, J.
,
Garg, P.
,
Fraser, V.
,
Padgitt-Cobb, L. K.
,
Martin, M.
,
Vining, K.
, and
Jaiswal, P.
,
“
Involving community in genes and pathway curation.
”
,
Database : the journal of biological databases and curation
, vol. 2019, 2019.
2016
A. C Quandt
,
Di, Y.
,
Elser, J.
,
Jaiswal, P.
, and
Spatafora, J. W.
,
“
Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides.
”
,
G3 (Bethesda, Md.)
, vol. 6, pp. 731-41, 2016.
2011
V. V. Peremyslov
,
Mockler, T. C.
,
Filichkin, S. A.
,
Fox, S. E.
,
Jaiswal, P.
,
Makarova, K. S.
,
Koonin, E. V.
, and
Dolja, V. V.
,
“
Expression, splicing, and evolution of the myosin gene family in plants.
”
,
Plant physiology
, vol. 155, pp. 1191-204, 2011.
V. Shulaev
,
Sargent, D. J.
,
Crowhurst, R. N.
,
Mockler, T. C.
,
Folkerts, O.
,
Delcher, A. L.
,
Jaiswal, P.
,
Mockaitis, K.
,
Liston, A.
,
Mane, S. P.
,
Burns, P.
,
Davis, T. M.
,
Slovin, J. P.
,
Bassil, N.
,
Hellens, R. P.
,
Evans, C.
,
Harkins, T.
,
Kodira, C.
,
Desany, B.
,
Crasta, O. R.
,
Jensen, R. V.
,
Allan, A. C.
,
Michael, T. P.
,
Setubal, J. Carlos
,
Celton, J. - M.
,
D Rees, J. G.
,
Williams, K. P.
,
Holt, S. H.
,
Rojas, J. Jairo Ruiz
,
Chatterjee, M.
,
Liu, B.
,
Silva, H.
,
Meisel, L.
,
Adato, A.
,
Filichkin, S. A.
,
Troggio, M.
,
Viola, R.
,
Ashman, T. - L.
,
Wang, H.
,
Dharmawardhana, P.
,
Elser, J.
,
Raja, R.
,
Priest, H. D.
,
Bryant, D. W.
,
Fox, S. E.
,
Givan, S. A.
,
Wilhelm, L. J.
,
Naithani, S.
,
Christoffels, A.
,
Salama, D. Y.
,
Carter, J.
,
Girona, E. Lopez
,
Zdepski, A.
,
Wang, W.
,
Kerstetter, R. A.
,
Schwab, W.
,
Korban, S. S.
,
Davik, J.
,
Monfort, A.
,
Denoyes-Rothan, B.
,
Arus, P.
,
Mittler, R.
,
Flinn, B.
,
Aharoni, A.
,
Bennetzen, J. L.
,
Salzberg, S. L.
,
Dickerman, A. W.
,
Velasco, R.
,
Borodovsky, M.
,
Veilleux, R. E.
, and
Folta, K. M.
,
“
The genome of woodland strawberry(Fragaria vesca).
”
,
Nature genetics
, vol. 43, pp. 109-16, 2011.
K. Youens-Clark
,
Buckler, E.
,
Casstevens, T.
,
Chen, C.
,
Declerck, G.
,
Derwent, P.
,
Dharmawardhana, P.
,
Jaiswal, P.
,
Kersey, P.
,
Karthikeyan, A. S.
,
Lu, J.
,
McCouch, S. R.
,
Ren, L.
,
Spooner, W.
,
Stein, J. C.
,
Thomason, J.
,
Wei, S.
, and
Ware, D.
,
“
Gramene database in 2010: updates and extensions.
”
,
Nucleic acids research
, vol. 39, pp. D1085-94, 2011.
2009
A. K. G. Kadegowda
,
Bionaz, M.
,
Thering, B.
,
Piperova, L. S.
,
Erdman, R. A.
, and
Loor, J. J.
,
“
Identification of internal control genes for quantitative polymerase chain reaction in mammary tissue of lactating cows receiving lipid supplements.
”
,
J Dairy Sci
, vol. 92, no. 5, pp. 2007-19, 2009.
B. J. Thering
,
Bionaz, M.
, and
Loor, J. J.
,
“
Long-chain fatty acid effects on peroxisome proliferator-activated receptor-alpha-regulated genes in Madin-Darby bovine kidney cells: optimization of culture conditions using palmitate.
”
,
J Dairy Sci
, vol. 92, no. 5, pp. 2027-37, 2009.
2008
S. Tramontana
,
Bionaz, M.
,
Sharma, A.
,
Graugnard, D. E.
,
Cutler, E. A.
,
Ajmone-Marsan, P.
,
Hurley, W. L.
, and
Loor, J. J.
,
“
Internal controls for quantitative polymerase chain reaction of swine mammary glands during pregnancy and lactation.
”
,
J Dairy Sci
, vol. 91, no. 8, pp. 3057-66, 2008.
S. Avraham
,
Tung, C. - W.
,
Ilic, K.
,
Jaiswal, P.
,
Kellogg, E. A.
,
McCouch, S.
,
Pujar, A.
,
Reiser, L.
,
Rhee, S. Y.
,
Sachs, M. M.
,
Schaeffer, M.
,
Stein, L.
,
Stevens, P.
,
Vincent, L.
,
Zapata, F.
, and
Ware, D.
,
“
The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.
”
,
Nucleic acids research
, vol. 36, pp. D449-54, 2008.
2006
P. Jaiswal
,
Ni, J.
,
Yap, I.
,
Ware, D.
,
Spooner, W.
,
Youens-Clark, K.
,
Ren, L.
,
Liang, C.
,
Zhao, W.
,
Ratnapu, K.
,
Faga, B.
,
Canaran, P.
,
Fogleman, M.
,
Hebbard, C.
,
Avraham, S.
,
Schmidt, S.
,
Casstevens, T. M.
,
Buckler, E. S.
,
Stein, L.
, and
McCouch, S.
,
“
Gramene: a bird’s eye view of cereal genomes.
”
,
Nucleic acids research
, vol. 34, pp. D717-23, 2006.
2005
Y. Yamazaki
and
Jaiswal, P.
,
“
Biological ontologies in rice databases. An introduction to the activities in Gramene and Oryzabase.
”
,
Plant & cell physiology
, vol. 46, pp. 63-8, 2005.
2002
D. Ware
,
Jaiswal, P.
,
Ni, J.
,
Pan, X.
,
Chang, K.
,
Clark, K.
,
Teytelman, L.
,
Schmidt, S.
,
Zhao, W.
,
Cartinhour, S.
,
McCouch, S.
, and
Stein, L.
,
“
Gramene: a resource for comparative grass genomics.
”
,
Nucleic acids research
, vol. 30, pp. 103-5, 2002.
T. A. Beardslee
,
Roy-Chowdhury, S.
,
Jaiswal, P.
,
Buhot, L.
,
Lerbs-Mache, S.
,
Stern, D. B.
, and
Allison, L. A.
,
“
A nucleus-encoded maize protein with sigma factor activity accumulates in mitochondria and chloroplasts.
”
,
The Plant journal : for cell and molecular biology
, vol. 31, pp. 199-209, 2002.
1990
R. L. Tanguay
,
Pfeifer, G. P.
, and
Riggs, A. D.
,
“
PCR-aided DNaseI footprinting of single copy gene sequences in permeabilized cells.
”
,
Nucleic Acids Res
, vol. 18, no. 19, p. 5902, 1990.